---
title: "tikatuwq: basic workflow"
author: "tikatuwq authors"
output: rmarkdown::html_vignette
vignette: >
  %\VignetteIndexEntry{tikatuwq: basic workflow}
  %\VignetteEngine{knitr::rmarkdown}
  %\VignetteEncoding{UTF-8}
---

```{r setup, include=FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.width = 7, fig.height = 4,
  dpi = 96
)
```

## Load demo dataset

```{r}
utils::data("wq_demo", package = "tikatuwq")
head(wq_demo)
```

## Compute IQA and check CONAMA compliance

```{r}
library(tikatuwq)

df <- wq_demo |>
  validate_wq() |>
  iqa(na_rm = TRUE)

conf <- conama_check(df, classe = "2")
head(conf)
```

## Summaries and plots

```{r}
plot_iqa(df)
```

```{r}
conf_long <- conama_summary(df, classe = "2")
head(conf_long)
```

## Render a report (writes to a temporary directory)

```{r, eval=FALSE}
# Avoid running nested rendering during vignette build on CRAN
out_file <- render_report(df)
out_file
```