## ----include = FALSE---------------------------------------------------------- knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ## ----setup-------------------------------------------------------------------- library(rosario) ## ----------------------------------------------------------------------------- data("ex1") ex1 ## ----message = FALSE---------------------------------------------------------- rosario_shifts <- rosario(ex1[1,]) head(rosario_shifts) ## ----fig.width=7.5, fig.height=6---------------------------------------------- plot_rosario(ex1[1, ], cols = 5) ## ----------------------------------------------------------------------------- temp_overlap(ex1, method = "pianka") #or temp_overlap(ex1, method = "czekanowski") ## ----------------------------------------------------------------------------- set.seed(1) mod <- get_null_model(ex1, method = "pianka", nsim = 100, parallel = FALSE) mod$p_value ## ----------------------------------------------------------------------------- temp_overlap_plot(mod)