Differential Gene Expression (DGE) Analysis Utility Toolkit R package DGEobj.utils version 1.0.6 CRAN Task View: Omics (https://CRAN.R-project.org/view=Omics) Provides a function toolkit to facilitate reproducible RNA-Seq Differential Gene Expression (DGE) analysis (Law (2015) <doi:10.12688/f1000research.9005.3>). The tools include both analysis work-flow and utility functions: mapping/unit conversion, count normalization, accounting for unknown covariates, and more. This is a complement/cohort to the 'DGEobj' package that provides a flexible container to manage and annotate Differential Gene Expression analysis results. Software Depends: R (>= 3.5.0) Imports: assertthat, DGEobj (>= 1.0.3), dplyr, methods, stats, stringr Suggests: biomaRt, canvasXpress, conflicted, edgeR, glue, ggplot2, IHW, limma, knitr, qvalue, RNASeqPower, rmarkdown, statmod, sva, testthat, zFPKM Connie Brett <connie@aggregate-genius.com> Comprehensive R Archive Network (CRAN) John Thompson [aut], Connie Brett [aut, cre], Isaac Neuhaus [aut], Ryan Thompson [aut] GPL-3 2022-05-19 application/tgz https://CRAN.R-project.org/package=DGEobj.utils doi:10.32614/CRAN.package.DGEobj.utils en-US