Last updated on 2025-09-22 21:48:46 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.52 | 248.19 | 261.71 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.14 | 271.97 | 282.11 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 309.63 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.58 | 299.55 | 314.13 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.63 | 254.74 | 270.37 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 183.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 181.00 | 201.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 197.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/130s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.722, system: 0.096, elapsed: 3.024 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.331, system: 0.384, elapsed: 15.619 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.738, system: 0.189, elapsed: 6.501 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.371 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.695, system: 0.719, elapsed: 26.739 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.491, system: 0.032, elapsed: 2.672 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.936, system: 0.065, elapsed: 14.319 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.013, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.791, system: 0.165, elapsed: 6.864 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.101, system: 0.298, elapsed: 25.464 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.033, elapsed: 2.576 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.858, system: 0.086, elapsed: 15.040 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.245 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.813, system: 0.195, elapsed: 6.885 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.250 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.159, system: 0.221, elapsed: 1.362 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.358, system: 0.570, elapsed: 27.303 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.041, elapsed: 2.398 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.953, system: 0.061, elapsed: 14.448 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.713, system: 0.170, elapsed: 6.617 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.250 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.174, system: 0.454, elapsed: 16.988 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.340, system: 0.774, elapsed: 42.027 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.502, system: 0.034, elapsed: 2.452 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.792, system: 0.043, elapsed: 15.154 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.342 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.433, system: 0.171, elapsed: 6.467 seconds]
Computing values for grid cells...
... done. [user: 0.152, system: 0.003, elapsed: 0.299 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.585, system: 0.284, elapsed: 25.610 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.475, system: 0.027, elapsed: 2.622 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.878, system: 0.073, elapsed: 14.914 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.313 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.619, system: 0.153, elapsed: 6.212 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.307 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.854, system: 0.295, elapsed: 25.313 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.476, system: 0.032, elapsed: 2.580 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.919, system: 0.080, elapsed: 14.698 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.311 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.603, system: 0.170, elapsed: 6.095 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.013, elapsed: 0.293 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.057, system: 0.231, elapsed: 1.152 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.037, system: 0.566, elapsed: 26.174 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.444, system: 0.028, elapsed: 2.242 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.928, system: 0.066, elapsed: 13.965 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.546, system: 0.172, elapsed: 6.268 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.005, elapsed: 0.316 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.021, system: 0.451, elapsed: 17.000 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.913, system: 0.759, elapsed: 41.124 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64