Last updated on 2025-12-13 20:49:56 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.56 | 219.04 | 229.60 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 251.46 | 265.62 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 171.00 | 181.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 206.00 | 216.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 232.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.625, system: 0.049, elapsed: 2.346 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.453, system: 0.097, elapsed: 11.492 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.203 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.858, system: 0.211, elapsed: 4.847 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.210 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.841, system: 0.398, elapsed: 19.775 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.597, system: 0.042, elapsed: 1.764 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.515, system: 0.143, elapsed: 12.624 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.315 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.199, system: 0.260, elapsed: 6.578 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.007, elapsed: 0.279 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.244, system: 0.493, elapsed: 22.261 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.690, system: 0.068, elapsed: 2.425 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.819, system: 0.269, elapsed: 14.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.017, elapsed: 0.363 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.090, system: 0.252, elapsed: 6.754 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.019, elapsed: 0.265 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.256, system: 0.278, elapsed: 1.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.887, system: 0.947, elapsed: 26.787 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.762, system: 0.081, elapsed: 2.539 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.819, system: 0.247, elapsed: 14.349 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.012, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.215, system: 0.314, elapsed: 6.462 seconds]
Computing values for grid cells...
... done. [user: 0.198, system: 0.012, elapsed: 0.299 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.329, system: 0.862, elapsed: 17.614 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.178, system: 1.562, elapsed: 42.564 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/147s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.744, system: 0.064, elapsed: 3.099 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.782, system: 0.192, elapsed: 16.996 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.017, elapsed: 0.385 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.962, system: 0.260, elapsed: 6.780 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.011, elapsed: 0.297 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.494, system: 0.580, elapsed: 28.602 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.798, system: 0.063, elapsed: 2.772 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.572, system: 0.133, elapsed: 15.754 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.012, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.816, system: 0.190, elapsed: 6.114 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.007, elapsed: 0.289 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.126, system: 0.443, elapsed: 26.177 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.626, system: 0.041, elapsed: 2.763 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.645, system: 0.193, elapsed: 14.805 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.015, elapsed: 0.242 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.002, system: 0.309, elapsed: 7.059 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.011, elapsed: 0.359 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.202, system: 0.307, elapsed: 1.858 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.502, system: 0.919, elapsed: 28.237 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.897, system: 0.092, elapsed: 4.269 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.615, system: 0.095, elapsed: 19.658 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.011, elapsed: 0.331 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.784, system: 0.183, elapsed: 7.974 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.337 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.824, system: 0.524, elapsed: 20.189 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.142, system: 0.939, elapsed: 54.111 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64