Last updated on 2026-03-31 22:52:22 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.27 | 260.73 | 275.00 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 13.47 | 269.93 | 283.40 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 303.98 | 325.98 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 347.80 | 378.80 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 195.00 | 216.00 | ERROR | |
| r-patched-linux-x86_64 | 1.1.4 | 12.13 | 329.92 | 342.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 346.01 | 360.17 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 376.00 | 387.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 195.00 | 216.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 7.00 | 626.00 | 633.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 243.00 | 267.00 | OK |
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in 'mapi-Ex.R' failed
The error most likely occurred in:
> ### Name: MAPI_GridHexagonal
> ### Title: Function MAPI_GridHexagonal
> ### Aliases: MAPI_GridHexagonal
>
> ### ** Examples
>
> data("samples")
> # Builds a grid of hexagonal cells according to samples coordinates (columns x and y)
> # using the EPSG:3857 projection and an halfwidth cell value of hw=250m.
> grid <- MAPI_GridHexagonal(samples, crs=3857, hw=250)
Building local cartesian grid...
Flavor: r-devel-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/333s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.572, system: 0.045, elapsed: 2.282 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.482, system: 0.086, elapsed: 12.624 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.017, elapsed: 0.529 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.648, system: 0.814, elapsed: 12.586 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.702, system: 0.995, elapsed: 29.208 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.045, elapsed: 2.045 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.595, system: 0.094, elapsed: 13.331 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.015, elapsed: 0.695 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.919, system: 0.749, elapsed: 69.074 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.193 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.052, system: 0.943, elapsed: 86.044 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.512, system: 0.034, elapsed: 2.240 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.595, system: 0.057, elapsed: 14.098 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.017, elapsed: 1.021 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.942, system: 0.867, elapsed: 124.048 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.436 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.301, system: 0.256, elapsed: 2.011 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.423, system: 1.275, elapsed: 145.032 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.031, elapsed: 3.356 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.592, system: 0.055, elapsed: 15.371 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.016, elapsed: 1.054 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.943, system: 0.717, elapsed: 27.233 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.197 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.876, system: 0.634, elapsed: 16.322 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.015, system: 1.490, elapsed: 64.700 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [112s/61s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.595, system: 0.042, elapsed: 1.217 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 7.001, system: 0.033, elapsed: 6.808 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.423, system: 0.018, elapsed: 0.156 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.469, system: 0.678, elapsed: 3.400 seconds]
Computing values for grid cells...
... done. [user: 0.218, system: 0.004, elapsed: 0.129 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.680, system: 0.810, elapsed: 12.146 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.572, system: 0.032, elapsed: 1.190 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 6.887, system: 0.025, elapsed: 6.680 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.440, system: 0.018, elapsed: 0.160 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.195, system: 0.653, elapsed: 3.291 seconds]
Computing values for grid cells...
... done. [user: 0.199, system: 0.004, elapsed: 0.123 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.316, system: 0.761, elapsed: 11.867 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.620, system: 0.033, elapsed: 1.232 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 6.711, system: 0.029, elapsed: 6.529 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.415, system: 0.016, elapsed: 0.151 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.329, system: 0.666, elapsed: 3.338 seconds]
Computing values for grid cells...
... done. [user: 0.196, system: 0.004, elapsed: 0.131 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.141, system: 0.255, elapsed: 0.765 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.629, system: 1.045, elapsed: 12.661 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.034, elapsed: 1.180 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 6.940, system: 0.029, elapsed: 6.742 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.424, system: 0.017, elapsed: 0.155 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.277, system: 0.677, elapsed: 3.324 seconds]
Computing values for grid cells...
... done. [user: 0.239, system: 0.005, elapsed: 0.154 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 24.461, system: 0.892, elapsed: 8.603 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 44.066, system: 1.698, elapsed: 20.683 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64