# Generated by roxygen2: do not edit by hand

export(calibrate_pixel_size)
export(output_dir)
export(quantify_directory)
export(quantify_mean_width)
export(quantify_mean_width_sections)
export(quantify_width_position)
export(scratch_dir)
export(select_roi)
export(threshold_apply)
export(threshold_vessel)
importFrom(av,av_encode_video)
importFrom(av,av_video_images)
importFrom(crayon,green)
importFrom(doFuture,registerDoFuture)
importFrom(dplyr,arrange)
importFrom(dplyr,bind_rows)
importFrom(dplyr,cur_data)
importFrom(dplyr,cur_group_id)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,group_split)
importFrom(dplyr,inner_join)
importFrom(dplyr,lag)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,row_number)
importFrom(dplyr,rowwise)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,summarize)
importFrom(dplyr,ungroup)
importFrom(foreach,"%do%")
importFrom(foreach,"%dopar%")
importFrom(foreach,`%do%`)
importFrom(foreach,`%dopar%`)
importFrom(foreach,foreach)
importFrom(future,availableCores)
importFrom(future,multisession)
importFrom(future,plan)
importFrom(ggplot2,`.pt`)
importFrom(ggplot2,aes)
importFrom(ggplot2,coord_flip)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_errorbar)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_raster)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,guide_colorbar)
importFrom(ggplot2,guide_legend)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_continuous)
importFrom(ggplot2,scale_color_gradient)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_colour_viridis_c)
importFrom(ggplot2,scale_fill_gradient)
importFrom(ggplot2,scale_fill_viridis_c)
importFrom(ggplot2,scale_shape_manual)
importFrom(ggplot2,scale_size_area)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_x_reverse)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,scale_y_reverse)
importFrom(ggplot2,theme)
importFrom(ggpubr,ggarrange)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,grid)
importFrom(graphics,points)
importFrom(grid,gpar)
importFrom(grid,grobTree)
importFrom(grid,linesGrob)
importFrom(imager,R)
importFrom(imager,as.cimg)
importFrom(imager,as.imlist)
importFrom(imager,autocrop)
importFrom(imager,ci)
importFrom(imager,clean)
importFrom(imager,draw_rect)
importFrom(imager,draw_text)
importFrom(imager,grabLine)
importFrom(imager,grabRect)
importFrom(imager,grayscale)
importFrom(imager,imappend)
importFrom(imager,imlist)
importFrom(imager,imrotate)
importFrom(imager,imsplit)
importFrom(imager,load.image)
importFrom(imager,pad)
importFrom(imager,parany)
importFrom(magrittr,"%>%")
importFrom(magrittr,`%>%`)
importFrom(pdftools,pdf_combine)
importFrom(pracma,findpeaks)
importFrom(progressr,handler_progress)
importFrom(progressr,handlers)
importFrom(progressr,progressor)
importFrom(progressr,with_progress)
importFrom(purrr,discard)
importFrom(readr,parse_number)
importFrom(readr,write_csv)
importFrom(rlang,`%||%`)
importFrom(rlang,hash)
importFrom(scales,alpha)
importFrom(scales,reverse_trans)
importFrom(stats,acf)
importFrom(stats,ksmooth)
importFrom(stats,median)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stats,time)
importFrom(stringr,str_remove)
importFrom(stringr,str_replace)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_split)
importFrom(stringr,str_to_upper)
importFrom(svDialogs,dlg_input)
importFrom(tcltk,tk_choose.dir)
importFrom(tcltk,tk_choose.files)
importFrom(tidyr,extract_numeric)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,separate)
importFrom(tools,file_path_sans_ext)
importFrom(utils,edit)
importFrom(utils,menu)
importFrom(utils,read.csv)
importFrom(utils,setTxtProgressBar)
importFrom(utils,write.csv)
