R: Offline Access to Taxonomic Databases

# Offline Access to Taxonomic Databases

## Documentation for package ‘taxizedb’ version 0.3.2

- DESCRIPTION file
- Package NEWS

## Help Pages

taxizedb-package | taxizedb
children | Retrieve immediate descendents of a taxon
classification | Retrieve the taxonomic hierarchies from local database
db_download | Download taxonomic databases
db_download_col | Download taxonomic databases
db_download_gbif | Download taxonomic databases
db_download_itis | Download taxonomic databases
db_download_ncbi | Download taxonomic databases
db_download_tpl | Download taxonomic databases
db_download_wfo | Download taxonomic databases
db_download_wikidata | Download taxonomic databases
db_load-defunct | Load taxonomic databases
db_load_col | Load taxonomic databases
db_load_gbif | Load taxonomic databases
db_load_itis | Load taxonomic databases
db_load_ncbi | Load taxonomic databases
db_load_tpl | Load taxonomic databases
db_load_wikidata | Load taxonomic databases
db_path | database path
downstream | Retrieve all taxa descending from a vector of taxa
name2taxid | Convert species names to taxon IDs
sql_collect | Query and get data back into a data.frame
src_col | src - dplyr src objects
src_gbif | src - dplyr src objects
src_itis | src - dplyr src objects
src_ncbi | src - dplyr src objects
src_taxizedb | src - dplyr src objects
src_tpl | src - dplyr src objects
src_wfo | src - dplyr src objects
src_wikidata | src - dplyr src objects
taxa_at | Get taxa at specific scientific ranks
taxid2name | Convert taxon IDs to scientific names
taxid2rank | Convert taxon IDs to scientific ranks
taxizedb | taxizedb
tdb_cache | Caching