AddPlottingStuff        Add plotting variables
BWR                     BW ratio calculation
BuildFeatureMatrix      Build a Feature matrix from the with speaq 2.0
                        processed data
BuildRawDataMatrix      Build a raw data matrix (spectra) from spectra
                        of unequal length
GetWinedata.subset      Get subset of Winedata for code examples
HMDBsearchR             Submit 1H NMR peaks to HMDB for compound search
PeakFilling             Peak filling of any missed peaks
PeakGrouper             Peak grouping with hierarchical clustering
ROIplot                 Plot NMR spectra, together with raw and grouped
                        peaks
SCANT                   SCAle, Normalize and Transform a data matrix
SilhouetR               SilhouetR
Winedata                Wine dataset
createNullSampling      Building a null hypothesis data
detectSpecPeaks         Peak detection for spectra
doShift                 Segment shift
dohCluster              CluPA function for multiple spectra.
dohClusterCustommedSegments
                        Use CluPA for alignment with additional
                        information
drawBW                  BW and percentile ratios plot
drawSpec                Spectral plot
drawSpecPPM             Plot NMR spectra from a spectra data matrix
findRef                 Reference finding
findSegPeakList         Selecting the peaks in a segment
findShiftStepFFT        Finding the shift-step by using Fast Fourier
                        Transform cross- correlation
getWaveletPeaks         Convert raw NMR spectra to peak data by using
                        wavelets
hClustAlign             CluPA function for two spectra.
hclust.grouping         Grouping with hierarchical clustering (used in
                        the PeakGrouper function)
makeSimulatedData       Create a simulated NMR spectral data
regroupR                Regroup faulty grouped peaks
relevant.features.p     Identify features (columns in the datamatrix)
                        which are significantly associated with the
                        outcome.
returnLocalMaxima       Local maximum detection
