# Generated by roxygen2: do not edit by hand

S3method(haystack,Seurat)
S3method(haystack,SingleCellExperiment)
S3method(haystack,data.frame)
S3method(haystack,matrix)
S3method(hclust_haystack,data.frame)
S3method(hclust_haystack,matrix)
S3method(kmeans_haystack,data.frame)
S3method(kmeans_haystack,matrix)
S3method(plot_gene_haystack,Seurat)
S3method(plot_gene_haystack,SingleCellExperiment)
S3method(plot_gene_haystack,data.frame)
S3method(plot_gene_haystack,matrix)
S3method(plot_gene_set_haystack,Seurat)
S3method(plot_gene_set_haystack,SingleCellExperiment)
S3method(plot_gene_set_haystack,data.frame)
S3method(plot_gene_set_haystack,matrix)
S3method(plot_rand_fit,haystack)
S3method(show_result_haystack,haystack)
export(haystack)
export(haystack_2D)
export(haystack_continuous_highD)
export(haystack_highD)
export(hclust_haystack)
export(hclust_haystack_highD)
export(hclust_haystack_raw)
export(kmeans_haystack)
export(kmeans_haystack_highD)
export(kmeans_haystack_raw)
export(plot_gene_haystack)
export(plot_gene_haystack_raw)
export(plot_gene_set_haystack)
export(plot_gene_set_haystack_raw)
export(plot_rand_fit)
export(read_haystack)
export(show_result_haystack)
export(write_haystack)
import(ggplot2)
import(methods)
import(reshape2)
import(stats)
importClassesFrom(Matrix,RsparseMatrix)
importFrom(Matrix,colMeans)
importFrom(Matrix,colSums)
importFrom(Matrix,rowMeans)
importFrom(Matrix,rowSums)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(splines,bs)
importFrom(splines,ns)
importFrom(utils,head)
importFrom(utils,packageVersion)
importFrom(utils,read.csv)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(utils,write.csv)
