Package: sccca
Type: Package
Title: Single-Cell Correlation Based Cell Type Annotation
Version: 0.1.1
Authors@R: c(person("Mohamed", "Soudy", email = "Mohmedsoudy2009@gmail.com", role=c("aut", "cre")), person("Sophie", "LE BARS", email = "sophie.lebars@uni.lu", role = "aut"), person("Enrico", "Glaab", email = "enrico.glaab@uni.lu", role = "aut"))
Maintainer: Mohamed Soudy <Mohmedsoudy2009@gmail.com>
Description: Performing cell type annotation based on cell markers from a unified database. The approach utilizes correlation-based approach combined with association analysis using Fisher-exact and phyper statistical tests (Upton, Graham JG. (1992) <DOI:10.2307/2982890>).
License: GPL (>= 3)
Encoding: UTF-8
Imports: Seurat, dplyr, plyr, scales, HGNChelper, openxlsx
RoxygenNote: 7.3.0
NeedsCompilation: no
Packaged: 2024-03-13 10:48:54 UTC; mohamed.soudy
Author: Mohamed Soudy [aut, cre],
  Sophie LE BARS [aut],
  Enrico Glaab [aut]
Repository: CRAN
Date/Publication: 2024-03-13 11:40:02 UTC
Built: R 4.6.0; ; 2026-04-26 21:24:30 UTC; unix
