R: Tools for Running the External 'SaTScan' Software using R Classes and Methods

# Tools for Running the External 'SaTScan' Software using R Classes and Methods

## Documentation for package ‘rsatscan’ version 1.0.10

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

rsatscan-package | Tools for Running the External 'SaTScan' Software using R Classes and Methods.
charlistopts | Change list version of paramaters into char vector
NHumbersidecas | North Humberside leukemian and lymphoma example- cases
NHumbersidectl | North Humberside leukemian and lymphoma example- controls
NHumbersidegeo | North Humberside leukemian and lymphoma example- geography
NMcas | New Mexico Brain Cancer example- cases
NMgeo | New Mexico Brain Cancer example- geography
NMpop | New Mexico Brain Cancer example- population
NYCfevercas | New York City Fever example- cases
NYCfevergeo | New York City Fever example- geography
print.satscan | Methods for satscan-class objects
read.col | Read SaTScan output files
read.gis | Read SaTScan output files
read.llr | Read SaTScan output files
read.rr | Read SaTScan output files
read.satscanmain | Read SaTScan output files
read.sci | Read SaTScan output files
rsatscan | Tools for Running the External 'SaTScan' Software using R Classes and Methods.
satscan | Run SaTScan in the OS
search_for_param | find earliest SaTScan parameter set that contains specified parameter
ss.options | Set or reset parameters to be used by SaTScan
ss.options.extra | Add lines to the current SaTScan parameter list
subin | Substitute new values into the input object
summary.satscan | Methods for satscan-class objects
write.adj | Write a SaTScan adj file
write.cas | Write a SaTScan cas (case) file
write.ctl | Write a SaTScan ctl (control) file
write.geo | Write a SaTScan geo file
write.grd | Write a SaTScan grd (grid) file
write.ha | Write a SaTScan ha (alternative hypothesis) file
write.max | Write a SaTScan max file
write.met | Write a SaTScan met file
write.nbr | Write a SaTScan nbr (neighbor) file
write.ntk | Write a SaTScan ntk (network) file
write.pop | Write a SaTScan pop (population) file
write.ss.prm | Write the SaTScan parameter file