biodecrypt              An algorithm to attribute unidentified
                        occurrence data based on a subset of identified
                        records
biodecrypt.cross        Perform a cross validation analysis to test the
                        attribution of biodecrypt on attributed records
biodecrypt.optimise     Comparing the values obtained by
                        biodecrypt.wrap, it optimises the combination
                        of alpha, buffer and ratio values to be used
                        with biodecrypt function.
biodecrypt.plot         Plotting biodecrypt and biodecrypt.cross
                        results.
biodecrypt.view         A function to view the hulls and manually
                        adjust alpha values before applying biodecrypt
biodecrypt.wrap         Wraps the biodecrypt.cross analysis to compare
                        the performance of biodecrypt among different
                        parameters.
dataisl                 West Mediterranean island butterflies provided
                        with the package recluster
datamod                 Virtual island faunas provided with the package
                        recluster
multiboot               A multiboot result obtained with the dataisl
                        dataset.
recluster               Ordination methods for biodiversity patterns.
recluster.boot          Bootstrap nodes of consensus trees
recluster.col           Projecting a two dimensional plot in RGB space
recluster.cons          Consensus tree from row-order permutations of a
                        dissimilarity matrix
recluster.dist          Compute a dissimilarity matrix using a battery
                        of beta-diversity indices
recluster.expl          Computes the dissimilarity contained in a
                        distance matrix which is explained by a
                        clustering solution.
recluster.expl.diss     Cuts a phylogenetic tree and provides cluster
                        membership of areas for custom of all possible
                        clustering solutions and their explained
                        dissimilarity.
recluster.fst           Compute some indexes of genetic differentiation
recluster.fst.pair      Compute pairwise indexes of genetic
                        differentiation among populations
recluster.group.col     Computes mean coordinate values and RGB
                        colours.
recluster.hist          Histogram of dissimilarity with tied and zero
                        values
recluster.identify.nodes
                        Evaluating solutions in multiscale bootstrap
recluster.line          Identifies a line in a configuration and
                        computes its intercept and angular coefficient
recluster.multi         Multiscale bootstrap based on a consensus tree
recluster.node.strength
                        Evaluating order row bias in a cluster
recluster.plot          A plotter for recluster bootstrapped objects
recluster.plot.col      Plotting data in RGB space
recluster.plot.matrix   Plot the values of the cells of a matrix in
                        grey scale
recluster.plot.pie      Plotting pies with RGB colours on a custom
                        coordinate space
recluster.plot.sites.col
                        Plotting RGB dots on a custom coordinate space
recluster.procrustes    Computes a procrustes analysis between two
                        matrices even if only a subset of cases are
                        shared.
recluster.region        Consensus-based regionalisation from repeated
                        row-order resampling
recluster.rotate        Rotates a bidimensional configuration according
                        to a line
recluster.test.dist     Test variation lost by a bidimensional
                        configuration when the coordinates of the
                        elements are reduced to the configuration of
                        the barycentres of a given series of groups.
treebut                 Phylogenetic tree for the butterfly species
                        included in dataisl dataset
treemod                 Hypothetical phylogenetic tree for the virtual
                        island faunas provided with the package
                        recluster
