footprint               Get transcription factor footprints with quaqc.
melt_reports            Melt sections of a quaqc report into a
                        data.frame.
parse_quaqc             Parse a JSON quaqc report file.
pileup                  Generate read pileups from BAMs with quaqc.
quaqc                   Run quaqc from within R.
quaqcr-pkg              quaqcr: Quick ATAC-seq QC in R
