# Generated by roxygen2: do not edit by hand

export(MDSMap_from_list)
export(PCA_progeny)
export(SNSN_LOD_deviations)
export(add_dup_markers)
export(assign_SN_SN)
export(assign_linkage_group)
export(bridgeHomologues)
export(calcSegtypeInfo)
export(checkF1)
export(check_map)
export(check_marker_assignment)
export(check_maxP)
export(cluster_SN_markers)
export(cluster_per_LG)
export(compare_maps)
export(consensus_LG_assignment)
export(consensus_LG_names)
export(convert_marker_dosages)
export(convert_polyRAD)
export(convert_updog)
export(correctDosages)
export(createTetraOriginInput)
export(create_phased_maplist)
export(define_LG_structure)
export(finish_linkage_analysis)
export(get_markertype_combinations)
export(gp_overview)
export(homologue_lg_assignment)
export(linkage)
export(linkage.gp)
export(marker_binning)
export(marker_data_summary)
export(merge_homologues)
export(overviewSNlinks)
export(parental_quantities)
export(phase_SN_diploid)
export(plot_hom_vs_LG)
export(plot_map)
export(plot_phased_maplist)
export(r_LOD_plot)
export(screen_for_NA_values)
export(screen_for_duplicate_individuals)
export(screen_for_duplicate_individuals.gp)
export(screen_for_duplicate_markers)
export(test_prefpairing)
export(write.TSNPM)
export(write.mct)
export(write.pwd)
export(write_nested_list)
export(write_pwd_list)
import(foreach)
import(grDevices)
import(graphics)
import(stats)
import(utils)
