R: Useful Functions for Visualization

# Useful Functions for Visualization

## Documentation for package ‘plutor’ version 0.1.0

- DESCRIPTION file
- Package README

## Help Pages

assign_colors | assign colors by a column in a tibble, for the convenience to use 'scale_color_identity()'
bioletter_colors | colors of nucleotides and amino acids
brewer_colors | select colors from 'RColorBrewer' package presets
canvas_size | width and height of built-in canvas
cm2in | trans inch to cm
cm2inch | trans cm to inch
cm2pt | trans cm to pt
extract_compare | extract the result of 'geom_compare' from a 'ggplot' object
geom2trace.GeomCompare | geom2trace.GeomCompare
geom2trace.GeomDescribe | geom2trace.GeomDescribe
GeomCompare | GeomCompare
GeomDescribe | GeomDescribe
geom_compare | add p value and fold change on a plot
geom_describe | Description values plot
gradient_colors | generate gradient colors
in2cm | trans inch to cm
in2mm | trans inch to mm
inch2cm | trans inch to cm
inch2mm | trans inch to mm
lpt | trans geom line point and theme line point to the real point
mini_diamond | Minimal tibble dataset adjusted from diamond
mm2in | trans mm to inch
mm2inch | trans mm to inch
mm2pt | trans mm to pt
plot_colors | plot colors
pl_init | set size, resolution and default theme
pl_save | save plot, support save into a blank canvas
pl_size | set repr size and resolution
PositionFloatxPL | PositionFloatxPL
PositionFloatyPL | PositionFloatyPL
position_floatxPL | a new Position object to create float x position
position_floatyPL | a new Position object to create float y position
ppt | trans geom text or point to the real point
pt2cm | trans pt to cm
pt2mm | trans pt to mm
revert_pos_scale | revert the position scale transformation
scale_ele | scale element according to a vector of element scales
scale_x_continuous_pl | A variant of 'scale_x_continuous()' to show axis minor breaks
scale_x_log10_pl | A variant of 'scale_x_log10()' to show axis minor breaks and better axis labels
scale_y_continuous_pl | A variant of 'scale_y_continuous()' to show axis minor breaks
scale_y_log10_pl | A variant of 'scale_y_log10()' to show axis minor breaks and better axis labels
sci_colors | select colors from 'ggsci' package presets
StatCompare | StatCompare
StatCountPL | StatCountPL
StatDescribe | StatDescribe
StatFuncPL | StatFuncPL
StatMeanPL | StatMeanPL
theme_pl | a new extensible theme
theme_pl0 | a blank theme
tpt | trans geom text or point to the real point
trans_pos_scale | perform the position scale transformation