R: Spatial Interpolation of Genetic Data

# Spatial Interpolation of Genetic Data

## Documentation for package ‘phylin’ version 2.0.2

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

phylin-package | Phylogenetic Landscape Interpolation.
d.gen | Genetic distance matrix between vipers and lineages.
extract.val | Extact pairwise values from a matrix in a specified order.
gen.variogram | Semi-variogram with the genetic distance matrix
geo.dist | Geographical distance matrix for samples and interpolation locations.
grid | Grid centroids for the Iberian Peninsula.
grid.image | Simple plot of interpolated grid.
gv.model | Fit a model to the semi-variogram.
idw | Inverse Distance Weighting interpolation
intgen.idw | Interpolation of genetic distances to a a grid of points.
krig | Simple and ordinary kriging.
midpoints | Midpoints between pairs of coordinates
mpinv | Generalized inverse of a matrix
mtest.gv | Tests if a 'gv' object has a model.
multispecies | Summarizes data from multiple species.
phylin | Phylogenetic Landscape Interpolation.
plot.gv | Plot a 'gv' object
predict.gv | Predict method for 'gen.variogram' object with model.
print.gv | Prints details of a 'gv' object
simul.env | Simulated environments.
simul.gen.dist | Simulated genetic distances.
simul.sample | Random samples from simulation.
summary.gv | Summary for 'gv' object
vipers | Vipers sample locations for 'd.gen' dataset.