R: Visualize, Summarize and Simulate Data from Pedigrees

# Visualize, Summarize and Simulate Data from Pedigrees

## Documentation for package ‘pedtricks’ version 0.5.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

convert_ped | Converts a pedigree with individuals specified as factors to a numeric pedigree
draw_ped | Produce a graphical representation of a pedigree
draw_pedA | Produce a graphical representation of the relatedness matrix of a pedigree
fix_ped | Manipulating pedigrees to prepare them for requirements of subsequent analyses Prepares a pedigree to conform with requirements of many softwares used in quantitative genetic analysis, as well as for many of the functions in pedtricks.
genome_sim | A function to simulate QTL and/or SNP data.
ggpedigree | ggpedigree: Plotting tool for simple and complex pedigrees.
gryphons | Example dataset for pedtricks examples and tutorial
h2_samp_var | Calculates expected sampling variance of a given $h^2$ from the A matrix of a pedigree, based on the method of Visscher and Goddard 2015 Genetics
micro_sim | Simulates microsatellite data across a pedigree.
pedigreeStats | Calculates a range of statistics of pedigrees
ped_stats | Calculates a range of statistics of pedigrees
phen_sim | A function to simulated phenotypic data
plot.ped_stats | Plot output from ped_stats
summary.ped_stats | Post-processes output from ped_stats
WarblerG | Seychelles Warbler Genotypes