Package: ontologySimilarity
Type: Package
Title: Calculating Ontological Similarities
Version: 2.9
Encoding: UTF-8
Date: 2026-01-30
Authors@R: person("Daniel", "Greene", email = "dg333@cam.ac.uk",role = c("aut", "cre"))
Maintainer: Daniel Greene <dg333@cam.ac.uk>
Description: Calculate similarity between ontological terms and sets of ontological terms based on term information content and assess statistical significance of similarity in the context of a collection of terms sets - Greene et al. 2017 <doi:10.1093/bioinformatics/btw763>.
License: GPL (>= 2)
Imports: Rcpp (>= 1.0.0), ontologyIndex (>= 2.0)
LinkingTo: Rcpp
Depends: R (>= 3.5.0)
Suggests: knitr, rmarkdown, paintmap
RoxygenNote: 7.3.2
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2026-01-31 20:25:41 UTC; dg
Author: Daniel Greene [aut, cre]
Repository: CRAN
Date/Publication: 2026-02-01 08:40:02 UTC
Built: R 4.6.0; aarch64-apple-darwin23; 2026-04-25 20:57:02 UTC; unix
Archs: ontologySimilarity.so.dSYM
