Package: neutralitytestr
Title: Test for a Neutral Evolutionary Model in Cancer Sequencing Data
Version: 0.0.3
Authors@R: person("Marc", "Williams", email = "marcjwilliams1@gmail.com", role = c("aut", "cre"))
Description: Package takes frequencies of mutations as reported by high throughput sequencing data from cancer and fits a theoretical neutral model of tumour evolution. Package outputs summary statistics and contains code for plotting the data and model fits. See Williams et al 2016 <doi:10.1038/ng.3489> and Williams et al 2017 <doi:10.1101/096305> for further details of the method.
Depends: R (>= 3.4)
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Imports: dplyr, ggplot2, scales, pracma, ggpmisc, cowplot
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
URL: https://github.com/marcjwilliams1/neutralitytestr
BugReports: https://github.com/marcjwilliams1/neutralitytestr/issues
RoxygenNote: 7.1.1
NeedsCompilation: no
Packaged: 2021-02-16 17:31:07 UTC; william1
Author: Marc Williams [aut, cre]
Maintainer: Marc Williams <marcjwilliams1@gmail.com>
Repository: CRAN
Date/Publication: 2021-02-16 18:00:06 UTC
Built: R 4.6.0; ; 2026-04-26 20:05:07 UTC; unix
