applyEmptyImageDimensions-methods
                        Apply Subsetting from Empty Image Dimensions
boxplot.nifti           Boxplot of Values in an Image
breaker                 Find Breaks for nifti Image Plotting
check_mask              Check Mask is Binary
check_mask_fail         Check Mask is Binary, Fail otherwise
check_nifti-methods     Check if nifti image or read in a nifti image
check_nifti_header-methods
                        Check if nifti image or read in a nifti header
check_outfile           Check output filename
checkimg-methods        Force object to filename
checknii-methods        Force object to filename with .nii extension
checkniigz-methods      Force object to filename with .nii.gz extension
cog                     Image Center of Gravity
colorbar                Add a colorbar to an ortho2 object
copyNIfTIHeader         Copy NIfTI Header to an array
cut.nifti               Perform Cut on an image
datatype                Change Data type for img
density.nifti           Density of Values in an Image
dicer                   Calculate Dice from a Table
double_ortho            Double Orthographic Display
dropEmptyImageDimensions
                        Drop Empty Image Dimensions
emptyImageDimensionsMask
                        Make Mask from Empty Image Dimensions
ensure_array            Ensure an array output
fast_dice_tab           Fast Dice Tabulation
fast_readnii            Reading NIfTI images through RNifti
file_imgext             Get Image file extension
finite_img-methods      Finite Image
flip_img                Flip NIfTI Image
getEmptyImageDimensions
                        Get Empty Image Dimensions
hist.nifti              Histogram of Values in an Image
images2matrix           Transform set of images to matrix
img_colour_df           Convert Image to Data.frame with Colors
img_indices             Retrieve Image Indices
img_list_to_ts          Image List to Time Series
img_ts_to_df            Image Time Series to Data.frame
img_ts_to_list          Image Time Series to list
img_ts_to_matrix        Image Time Series to Matrix
maskEmptyImageDimensions-methods
                        Apply Masking from Empty Image Dimensions
mask_img                Mask Image
mask_vals               Extract or Replace Values Inside a Mask
mean.nifti              Mean of Values in an Image
minmax_img-methods      Normalize Image using Range
multi_overlay           Create Multi-Image Plot with Overlays
newnii                  Resets image parameters for a copied nifti
                        object
niftiarr                Make new nifti from array
nii.stub                Grab nii file stubname
orient_rpi              Reorient an Image to RPI orientation
ortho2                  Orthographic Display, added options
ortho_diff              Plot differences for Prediction and Gold
                        Standard
parse_img_ext           Parse Image Extensions
quantile.nifti          Sample Quantiles
quantile_img            Create Quantile Image
random_nifti            Create Random 'nifti' object
randomize_mask          Randomize Image based on Mask
readNIfTI2              readNIfTI with default non-reorientation
read_rpi                Read NIfTI file reoriented to RPI
remake_img              Remake Image from Vector
remap_filename          Build Filename (usually for images)
replaceEmptyImageDimensions-methods
                        Replace Subsetting from Empty Image Dimensions
replace_dropped_dimensions
                        Remake Dropped Dimensions
replace_outside_surface
                        Replace Values Outside Surface of image
rescale_img             Image Rescaler
reverse_orient_rpi      Reverse Reorientation an Image to RPI
                        orientation
robust_window           Window image based on quantiles of Image
same_dims               Check if Objects have Same Dimensions
separate_img-methods    Separate Labeled Image into Multiple Binary
                        Images
slice_colour_df         Slice a Image Color Data.frame
subset_dti-methods      Subset DTI data based on b-values #'
tempimg                 Create temporary nii.gz file
window_img              nifti image windower
writeNIfTI2             writeNIfTI with default non-reorientation
write_nifti             General NIfTI Writer
xyz                     Image Center of Gravity Wrapper
zero_pad                Zero pads an image
zlimmer                 Find Image z-limits
zscore_img              Get Z-score over a margin of an img
