R: Regularization Paths for SCAD and MCP Penalized Regression Models

# Regularization Paths for SCAD and MCP Penalized Regression Models

## Documentation for package ‘ncvreg’ version 3.16.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

assign_fold | Assign folds for cross-validation
AUC | AUC for cv.ncvsurv objects
AUC.cv.ncvsurv | AUC for cv.ncvsurv objects
coef.cv.ncvreg | Model predictions based on a fitted ncvreg object.
coef.ncvreg | Model predictions based on a fitted ncvreg object.
coef.ncvsurv | Model predictions based on a fitted 'ncvsurv' object.
cv.ncvreg | Cross-validation for ncvreg/ncvsurv
cv.ncvsurv | Cross-validation for ncvreg/ncvsurv
Heart | Risk factors associated with heart disease
intervals | Projection base test statistics and intervals
local_mfdr | Estimate local mFDR for all features
logLik.ncvreg | Extract Log-Likelihood
logLik.ncvsurv | Extract Log-Likelihood
Lung | VA lung cancer data set
mfdr | Marginal false discovery rates
ncvfit | Direct interface for nonconvex penalized regression (non-pathwise)
ncvreg | Fit an MCP- or SCAD-penalized regression path
ncvsurv | Fit an MCP- or SCAD-penalized survival model
perm.ncvreg | Permutation fitting for ncvreg
permres | Permute residuals for a fitted ncvreg model
permres.ncvreg | Permute residuals for a fitted ncvreg model
plot.cv.ncvreg | Plots the cross-validation curve from a cv.ncvreg object
plot.mfdr | Plot marginal false discovery rate curves
plot.ncvreg | Plot coefficients from a ncvreg object
plot.ncvsurv.func | Plot survival curve for ncvsurv model
predict.cv.ncvreg | Model predictions based on a fitted ncvreg object.
predict.cv.ncvsurv | Model predictions based on a fitted ncvreg object.
predict.ncvreg | Model predictions based on a fitted ncvreg object.
predict.ncvsurv | Model predictions based on a fitted 'ncvsurv' object.
print.summary.cv.ncvreg | Summarizing cross-validation-based inference
print.summary.ncvreg | Summary method for ncvreg objects
Prostate | Factors associated with prostate specific antigen
prostate | Factors associated with prostate specific antigen
residuals.ncvreg | Extract residuals from a ncvreg or ncvsurv fit
std | Standardizes a design matrix
summary.cv.ncvreg | Summarizing cross-validation-based inference
summary.ncvreg | Summary method for ncvreg objects