mx_dataset              Generates mx_dataset
mx_normalize            Normalizes multiplexed data
mx_sample               Sample multiplexed dataset for 'mxnorm'.
plot_mx_density         Visualize marker density before/after
                        normalization by marker and slide
plot_mx_discordance     Visualize Otsu discordance scores by marker and
                        slide
plot_mx_proportions     Visualize variance proportions by marker and
                        table
plot_mx_umap            Visualize UMAP dimension reduction algorithm
print.summary.mx_dataset
                        Extension of 'print' S3 method to print
                        'summary.mx_dataset' objects
run_otsu_discordance    Calculate Otsu discordance scores using
                        specified threshold for an 'mx_dataset' object.
run_reduce_umap         Run UMAP dimension reduction algorithm on an
                        'mx_dataset' object.
run_var_proportions     Run random effects modeling on 'mx_dataset'
                        object to determine proportions of variance at
                        the slide level
summary.mx_dataset      Extension of 'summary' S3 method to summarize
                        'mx_dataset' objects
