Package: msig
Title: An R Package for Exploring Molecular Signatures Database
Version: 1.0
Authors@R: 
    c(
    person("Jing","Zhang",role = c("aut", "cre"),email = "zj391120@163.com"),
    person("Zhi", "Jin", role="aut")
    )
Description: The Molecular Signatures Database ('MSigDB') is one of the most widely 
    used and comprehensive databases of gene sets for performing gene set 
    enrichment analysis <doi:10.1016/j.cels.2015.12.004>. The 'msig' package provides 
    you with powerful, easy-to-use and flexible query functions for the 'MsigDB' 
    database.
        There are 2 query modes in the 'msig' package: online query and local query. 
    Both queries contain 2 steps: gene set name and gene.
        The online search is divided into 2 modes: registered search and 
    non-registered browse. For registered search, email that you registered should 
    be provided.
        Local queries can be made from local database, which can be updated by msig_update() function.
License: GPL-2
Encoding: UTF-8
RoxygenNote: 7.1.1
Imports: do, rvest, xml2, set, plyr, httr, jsonlite, utils, kableExtra,
        tmcn, crayon, dplyr, stringr, sqldf
Depends: R (>= 4.1.0)
NeedsCompilation: no
Packaged: 2021-06-27 00:14:35 UTC; asus
Author: Jing Zhang [aut, cre],
  Zhi Jin [aut]
Maintainer: Jing Zhang <zj391120@163.com>
Repository: CRAN
Date/Publication: 2021-06-29 07:50:02 UTC
Built: R 4.6.0; ; 2026-04-26 19:55:45 UTC; unix
