Package: mixtree
Title: A Statistical Framework for Comparing Sets of Trees
Version: 0.0.1
Authors@R: 
    person("Cyril", "Geismar", , "c.geismar21@imperial.ac.uk", role = c("aut", "cre", "cph"),
           comment = c(ORCID = "0000-0002-8486-5890"))
Description: Statistical framework for comparing sets of trees using hypothesis testing methods. Designed for transmission trees, phylogenetic trees, and directed acyclic graphs (DAGs), the package implements chi-squared tests to compare edge frequencies between sets and PERMANOVA to analyse topological dissimilarities with customisable distance metrics, following Anderson (2001) <doi:10.1111/j.1442-9993.2001.01070.pp.x>.
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.3.2
Imports: igraph, treespace, vegan
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
URL: https://cygei.github.io/mixtree/
NeedsCompilation: no
Packaged: 2025-03-03 11:48:59 UTC; cg1521
Author: Cyril Geismar [aut, cre, cph] (<https://orcid.org/0000-0002-8486-5890>)
Maintainer: Cyril Geismar <c.geismar21@imperial.ac.uk>
Repository: CRAN
Date/Publication: 2025-03-05 13:00:06 UTC
Built: R 4.6.0; ; 2026-04-25 13:58:29 UTC; unix
