R: Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)

# Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)

## Documentation for package ‘meteR’ version 1.2

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

meteR-package | Analyses with the Maximum Entropy Theory of Ecology (METE)
anbo | Community abundance data for a desert grassland (anza borrego)
arth | Arthropod community abundance data
downscaleSAR | Downscale the species area relationship (SAR) or endemics area relationship (EAR)
ebar | Relationship between mean metabolic rate (\bar{epsilon}) and abundance
empiricalSAR | Empirical SAR or EAR
ipd | Individual Power Distribution
ipd.meteESF | Individual Power Distribution
logLik.meteDist | Compute log-likelihood of a meteDist object
logLikZ | Compute log-likelihood z-score
logLikZ.meteDist | Compute log-likelihood z-score
meteDist2Rank | meteDist2Rank
meteESF | meteESF
meteNu | Equation of the PMF for the METE species metabolic rate distribution
metePhi | Equation of the METE species abundance distribution
metePi | Equation of the PMF of the METE spatial species abundance distribution
metePsi | Equation of the PMF for the METE individual metabolic rate distribution
meteR | Analyses with the Maximum Entropy Theory of Ecology (METE)
meteSAR | Compute METE species area relationship (SAR)
meteSSF | meteSSF
meteTheta | Equation of the PMF for the METE Intra-specific metabolic rate distribution
mse | Computes mean squared error for rank or cdf
mse.meteDist | Computes mean squared error for rank or cdf
mseZ | Compute z-score of mean squared error
mseZ.meteDist | Compute z-score of mean squared error
plot.damuth | Plot the relationship between abundance and metabolic rate, i.e. objects of class damuth
plot.meteDist | Plot METE distributions and associated data
plot.meteRelat | Plot predicted METE relationships and associated observed relationship seen in data
plot.sar | Plot the species abundance distribution (SAR), i.e. objects of class sar
predictESF | predictESF
print.damuth | print.damuth
print.meteDist | Print summaries of 'meteDist' objects
print.meteESF | print.meteESF
print.meteRelat | Print summaries of 'meteRelat' objects
print.sar | print.sar
residuals.meteDist | Compute residuals between METE predictions and data of a meteDist object
residuals.meteRelat | Compute residuals between METE predictions and date of a meteRelat object
sad | METE species abundance distribution
sad.meteESF | METE species abundance distribution
sipd | Generic method to obtain the species-level individual power distribution (SIPD)
sipd.meteESF | Generic method to obtain the species-level individual power distribution (SIPD)
spd | Species Power Distribution
spd.meteESF | Species Power Distribution
ssad | Species Spatial Abundance Distribution
ssad.meteSSF | Species Spatial Abundance Distribution
upscaleSAR | upscale SAR