CVaR                    Conditional Value at Risk
VaR                     Value at Risk
add_dens_polygon        Add a kernel density polygon
annotate                Add annotations to panel
count_quasi_exts        Take 'meta_sim' output objects and count quasi
                        extinctions
create_asset_weights    Create an asset weights matrix
custom_bw               Custom bandwidth
est_beta_params         Get beta parameters from mean and variance
fastlm                  Super fast linear regression
fit_ricker              Fit Ricker linear regression
generate_env_ts         Create an environmental time series.
generate_straying_matrix
                        Generate a matrix of straying proportions
                        within a metapopulation
get_conserv_plans_mv    Run simulation for conservation schemes
get_efficient_frontier
                        Get the efficient frontier from mean and
                        variance values
get_port_vals           Get portfolio mean and variance values
get_quantile_contour    Get quantile contour
gg_color_hue            ggplot2-like colour scale in HCL space
impl_error              Add implementation error
is_element              Check if x is an element of y.
meta_sim                Run a single metapopulation simulation.
metafolio               metafolio: An R package to simulate
                        metapopulations for portfolio optimization
metasim_base            Base-level metapopulation simulation function
monte_carlo_portfolios
                        Monte Carlo asset weights into portfolios
my.axis                 Add a pretty axis
optim_thermal           Optimize to find optimal max productivity
                        Ricker a
plot_cons_plans         Plot conservation plans in mean-variance space
plot_correlation_between_returns
                        Plot correlation of returns (i.e.
                        metapopulation abundance) across stocks.
plot_efficient_portfolios
                        Basic plot of efficient portfolio and asset
                        contributions
plot_panel_lines        Standard matrix plot of values by stream for
                        one panel:
plot_rickers            Plot sample Ricker curves for each stock
plot_sim_ts             Plot various time series from a simulation run
plot_sp_A_ts            Plot sample time series from a portfolio
                        simulation
ricker                  A simple Ricker model
ricker_escapement       Assign a salmon escapement target based on a
                        Ricker curve
ricker_v_t              Ricker stock-recruit function with specified
                        error
run_cons_plans          Run conservation plans and return the portfolio
                        mean and variance values
thermal_area            Return desired squared deviation between
                        desired area and actual area under a curve
thermal_curve_a         Create thermal tolerance curves.
thermal_integration     Integrate thermal tolerance curves to get
                        maximum Ricker a values
