add_rows_if_not_exists	add_rows_if_not_exists
ata_cal	ata_cal
convert_abundance_to_presence	convert_abundance_to_presence
create_sub_module_sample	create_sub_module_sample
escape_special_chars	escape_special_chars
extract_inner_brackets	extract_inner_brackets
group_ko_by_module	group_ko_by_module
KO_pathway_ref	KO_pathway_ref
KO_Sample_wide	KO_Sample_wide
mclink	mclink
merge_module_name	merge_module_name
process_all_modules	process_all_modules
process_all_pathways	process_all_pathways
process_module_brackets	process_module_brackets
process_module_definition	process_module_definition
process_module_loop_comma	process_module_loop_comma
process_module_loop_plus	process_module_loop_plus
process_module_loop_plu_comma	process_module_loop_plu_comma
process_module_step	process_module_step
process_module_structure	process_module_structure
process_step_comma	process_step_comma
process_step_direct	process_step_direct
process_step_plus	process_step_plus
process_step_space	process_step_space
read_and_process_KO_table	read_and_process_KO_table
read_and_process_pathway_infor	read_and_process_pathway_infor
remove_outer_brackets	remove_outer_brackets
