R: MAP-Bayesian Estimation of PK Parameters

# MAP-Bayesian Estimation of PK Parameters

## Documentation for package ‘mapbayr’ version 0.10.2

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

add_covariates | Add covariate columns to a dataset
add_covariates.data.frame | Add covariate columns to a dataset
add_covariates.mrgmod | Add covariate columns to a dataset
adm_cmt | Read compartment options in a model
adm_lines | Deprecated functions
adm_rows | Add administration lines to a dataset
adm_rows.data.frame | Add administration lines to a dataset
adm_rows.missing | Add administration lines to a dataset
adm_rows.mrgmod | Add administration lines to a dataset
as.data.frame.mapbayests | Return the mapbay_tab as a data.frame
augment | Compute full PK profile prediction from mapbayr estimates.
augment.mapbayests | Compute full PK profile prediction from mapbayr estimates.
bar_phi | Compare results to NONMEM .phi
check_mapbayr_model | Check if model is valid for 'mapbayr'
compute_ofv | Compute the objective function value
compute_weights | Average predictions from multiple models
data_helpers | Data helpers: functions to build the dataset
deprecations | Deprecated functions
do_compute_ofv | Compute the objective function value
do_mapbayr_sim | Simulate with mapbayr
do_model_averaging | Average predictions from multiple models
est001 | Estimation object
eta | Generate a vector of "ETA"
exdata | Example model and data
exmodel | Example model and data
exmodel_exdata | Example model and data
filter.mrgmod | Filter a dataset within a mrgmod
get_cov | Get content from object
get_cov.mapbayests | Get content from object
get_data | Get content from object
get_data.mapbayests | Get content from object
get_data.mrgmod | Get content from object
get_eta | Get content from object
get_eta.mapbayests | Get content from object
get_param | Get content from object
get_param.mapbayests | Get content from object
get_phi | Get content from object
get_phi.mapbayests | Get content from object
get_x | Get content from object
hist.mapbayests | Plot posterior distribution of bayesian estimates
mapbayest | Estimate parameters (maximum a posteriori)
mapbayr_plot | Make mapbayr plot
mapbayr_vpc | Visual Predicted Checks
mbrest | Deprecated functions
merge_phi | Compare results to NONMEM .phi
model_averaging | Average predictions from multiple models
obs_cmt | Read compartment options in a model
obs_lines | Deprecated functions
obs_rows | Add observation lines to a dataset
obs_rows.data.frame | Add observation lines to a dataset
obs_rows.missing | Add observation lines to a dataset
obs_rows.mrgmod | Add observation lines to a dataset
parse_datehour | Parse value to "POSIXct"
plot.mapbayests | Plot predictions from mapbayests object
plot_phi | Compare results to NONMEM .phi
preprocess.ofv | Preprocess model and data for ofv computation
preprocess.ofv.fix | Preprocess model and data for ofv computation
preprocess.ofv.id | Preprocess model and data for ofv computation
preprocess.optim | Pre-process: arguments for optimization function
print.mapbayests | Print a mapbayests object
read_nmphi | Compare results to NONMEM .phi
summarise_phi | Compare results to NONMEM .phi
use_posterior | Use posterior estimation
vs_nonmem | Compare results to NONMEM .phi
x_cmt | Read compartment options in a model