# Transfer Learning with Keras Applications

## Introduction

Transfer learning is a powerful technique where a model developed for one task is reused as the starting point for a model on a second task. It is especially popular in computer vision, where pre-trained models like `ResNet50`, which were trained on the massive ImageNet dataset, can be used as powerful, ready-made feature extractors.

The `kerasnip` package makes it easy to incorporate these pre-trained Keras Applications directly into a `tidymodels` workflow. This vignette will demonstrate how to:

1. Define a `kerasnip` model that uses a pre-trained `ResNet50` as a frozen base layer.
2. Add a new, trainable classification “head” on top of the frozen base.
3. Tune the hyperparameters of the new classification head using a standard `tidymodels` workflow.

## Setup

First, we load the necessary packages.

    library(kerasnip)
    library(tidymodels)
    #> ── Attaching packages ────────────────────────────────────────────────────────────────────────────── tidymodels 1.5.0 ──
    #> ✔ broom        1.0.12     ✔ recipes      1.3.2
    #> ✔ dials        1.4.3      ✔ rsample      1.3.2
    #> ✔ dplyr        1.2.1      ✔ tailor       0.1.0
    #> ✔ ggplot2      4.0.3      ✔ tidyr        1.3.2
    #> ✔ infer        1.1.0      ✔ tune         2.1.0
    #> ✔ modeldata    1.5.1      ✔ workflows    1.3.0
    #> ✔ parsnip      1.5.0      ✔ workflowsets 1.1.1
    #> ✔ purrr        1.2.2      ✔ yardstick    1.4.0
    #> ── Conflicts ───────────────────────────────────────────────────────────────────────────────── tidymodels_conflicts() ──
    #> ✖ purrr::discard() masks scales::discard()
    #> ✖ dplyr::filter()  masks stats::filter()
    #> ✖ dplyr::lag()     masks stats::lag()
    #> ✖ recipes::step()  masks stats::step()
    library(keras3)
    #>
    #> Attaching package: 'keras3'
    #> The following object is masked from 'package:yardstick':
    #>
    #>     get_weights
    #> The following object is masked from 'package:infer':
    #>
    #>     generate

## Data Preparation

We’ll use the CIFAR-10 dataset, which consists of 60,000 32x32 color images in 10 classes. `keras3` provides a convenient function to download it.

The `ResNet50` model was pre-trained on ImageNet, which has a different set of classes. Our goal is to fine-tune it to classify the 10 classes in CIFAR-10.

    # Load CIFAR-10 dataset
    cifar10 <- dataset_cifar10()

    # Separate training and test data
    x_train <- cifar10$train$x
    y_train <- cifar10$train$y
    x_test <- cifar10$test$x
    y_test <- cifar10$test$y

    # Rescale pixel values from [0, 255] to [0, 1]
    x_train <- x_train / 255
    x_test <- x_test / 255

    # Convert outcomes to factors for tidymodels
    y_train_factor <- factor(y_train[, 1])
    y_test_factor <- factor(y_test[, 1])

    # For tidymodels, it's best to work with data frames.
    # We'll use a list-column to hold the image arrays.
    train_df <- tibble::tibble(
      x = lapply(seq_len(nrow(x_train)), function(i) x_train[i, , , , drop = TRUE]),
      y = y_train_factor
    )

    test_df <- tibble::tibble(
      x = lapply(seq_len(nrow(x_test)), function(i) x_test[i, , , , drop = TRUE]),
      y = y_test_factor
    )

    # Use a smaller subset for faster vignette execution
    train_df_small <- train_df[1:500, ]
    test_df_small <- test_df[1:100, ]

## Functional API with a Pre-trained Base

The standard approach for transfer learning is to use the Keras Functional API. We will define a model where: 1. The base is a pre-trained `ResNet50`, with its final classification layer removed (`include_top = FALSE`). 2. The weights of the base are frozen (`trainable = FALSE`) so that only our new layers are trained. 3. A new classification “head” is added, consisting of a flatten layer and a dense output layer.

### Define Layer Blocks

    # Input block: shape is determined automatically from the data
    input_block <- function(input_shape) {
      layer_input(shape = input_shape)
    }

    # ResNet50 base block
    resnet_base_block <- function(tensor) {
      # The base model is not trainable; we use it for feature extraction.
      resnet_base <- application_resnet50(
        weights = "imagenet",
        include_top = FALSE
      )
      resnet_base$trainable <- FALSE
      resnet_base(tensor)
    }

    # New classification head
    flatten_block <- function(tensor) {
      tensor |> layer_flatten()
    }

    output_block_functional <- function(tensor, num_classes) {
      tensor |> layer_dense(units = num_classes, activation = "softmax")
    }

### Create the `kerasnip` Specification

We connect these blocks using `create_keras_functional_spec()`.

    create_keras_functional_spec(
      model_name = "resnet_transfer",
      layer_blocks = list(
        input = input_block,
        resnet_base = inp_spec(resnet_base_block, "input"),
        flatten = inp_spec(flatten_block, "resnet_base"),
        output = inp_spec(output_block_functional, "flatten")
      ),
      mode = "classification"
    )

### Fit and Evaluate the Model

Now we can use our new `resnet_transfer()` specification within a `tidymodels` workflow.

    spec_functional <- resnet_transfer(
      fit_epochs = 5,
      fit_validation_split = 0.2
    ) |>
      set_engine("keras")

    rec_functional <- recipe(y ~ x, data = train_df_small)

    wf_functional <- workflow() |>
      add_recipe(rec_functional) |>
      add_model(spec_functional)

    fit_functional <- fit(wf_functional, data = train_df_small)

    # Evaluate on the test set
    predictions <- predict(fit_functional, new_data = test_df_small)
    #> 4/4 - 9s - 2s/step
    bind_cols(predictions, test_df_small) |>
      accuracy(truth = y, estimate = .pred_class)
    #> # A tibble: 1 × 3
    #>   .metric  .estimator .estimate
    #>   <chr>    <chr>          <dbl>
    #> 1 accuracy multiclass      0.11

Even with a small dataset and few epochs, the pre-trained features from ResNet50 give us a reasonable starting point for accuracy.

## Conclusion

This vignette demonstrated how `kerasnip` bridges the world of pre-trained Keras applications with the structured, reproducible workflows of `tidymodels`.

The Functional API is the most direct way to perform transfer learning by attaching a new head to a frozen base model.

This approach allows you to leverage the power of deep learning models that have been trained on massive datasets, significantly boosting performance on smaller, domain-specific tasks.