OV                      Ovarian Cancer Datasets
calculatePermutedScoreByGeneSampling
                        Calculate the permuted latent trait by gene
                        sampling
computeAbility          Calculate latent traits for a given response
                        matrix and item parameters using MLE
dichotomize             A wrapper that is able to dichotomize
                        expression, methylation and CN data
dichotomizeCN           Dichotomizing copy number data based on
                        segmented data (i.e. log2ratio).
dichotomizeExpr         Dichotomize the expression data given both
                        tumor and normal samples.
dichotomizeMethy        Dichotomize the methylation data given both
                        tumor and normal controls.
fitOnSinglePlat         Fit IRT model on a single platform
intIRTeasyRun           The easyrun function for integrating multiple
                        modalities of high throughput assays using
                        binary input matrix.
intIRTeasyRunFromRaw    The easyrun function for integrating multiple
                        modalities of high throughput assays using raw
                        data.
simulateBinaryResponseMat
                        Simulate binary response matrix according to
                        2-parameter Item Characteristic Function for
                        given latent traits and item parameters.
