R: Incidence Estimation Tools

# Incidence Estimation Tools

## Documentation for package ‘inctools’ version 1.0.15

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

inctools-package | inctools: A Package for Incidence Estimation
excalibdata | The dataset 'excalibdata.Rdata' contains example data from an evaluation of an assay measuring recency of infection. At an assay result of <10, the specimen is considered to be recently infected. It further contains viral load data, which is commonly used to reduce false recency. For example, when recency is defined as assay result <10 and viral load > 1000, the FRR is substantially lower (but the MDRI is also reduced).
frrcal | Estimate False-Recent Rate
inccounts | Incidence and incidence difference statistics from trinomial counts of HIV and recency
incpower | Power and Required Sample Size
incprecision | Precision and Required Sample Size
incprops | Incidence and incidence difference statistics from trinomial prevalences of HIV and recency
inctools | inctools: A Package for Incidence Estimation
mdrical | Estimate Mean Duration of Recent Infection (MDRI)
prevcounts | Prevalence and Relative Standard Errors by Counts