Package: iTOP
Type: Package
Title: Inferring the Topology of Omics Data
Version: 1.0.2
Author: Nanne Aben
Maintainer: Nanne Aben <nanne.aben@gmail.com>
Description: Infers a topology of relationships between different datasets, such as multi-omics and phenotypic data recorded on the same samples. We based this methodology on the RV coefficient (Robert & Escoufier, 1976, <doi:10.2307/2347233>), a measure of matrix correlation, which we have extended for partial matrix correlations and binary data (Aben et al., 2018, <doi:10.1101/293993>).
Imports: Matrix, corpcor
License: GPL-2
Encoding: UTF-8
LazyData: true
Suggests: knitr, rmarkdown, NMF, pcalg, Rgraphviz
VignetteBuilder: knitr
RoxygenNote: 6.0.1
NeedsCompilation: no
Packaged: 2018-06-13 08:58:43 UTC; n.aben
Repository: CRAN
Date/Publication: 2018-06-13 09:16:06 UTC
Built: R 4.6.0; ; 2026-04-26 01:00:07 UTC; unix
