Package: haplotyper
Type: Package
Title: Tool for Clustering Genotypes in Haplotypes
Version: 0.1
Date: 2016-03-28
Author: Sebastian Simondi <sebastian.simondi@gmail.com> and Gaston Quero, with
 contributions from Victoria Bonnecarrere and Lucia Gutierrez
Maintainer: Gaston Quero <gastonquero@gmail.com>
Description: Function to  identify  haplotypes
  within QTL (Quantitative Trait Loci). One haplotype is a combination of SNP
  (Single Nucleotide Polymorphisms) within the QTL. This function groups
  together all individuals of a population with the same haplotype.
  Each group contains individual with the same allele in each SNP,
  whether or not missing data. Thus, haplotyper groups individuals,
  that to be imputed, have a non-zero probability of having the same alleles
  in the entire sequence of SNP's. Moreover, haplotyper calculates such
  probability from relative frequencies.
Depends: R (>= 2.10)
License: GPL-3
LazyData: TRUE
RoxygenNote: 5.0.1
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
Imports: graphics, utils
NeedsCompilation: no
Packaged: 2016-04-06 14:44:27 UTC; GQ
Repository: CRAN
Date/Publication: 2016-04-06 17:23:47
Built: R 4.6.0; ; 2026-04-25 19:27:31 UTC; unix
