R: Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm

# Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm

## Documentation for package ‘hapassoc’ version 1.2-9

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

anova.hapassoc | Return likelihood ratio test of haplotype effect
hapassoc | EM algorithm to fit maximum likelihood estimates of trait associations with SNP haplotypes
hypoDat | Simulated data for a hypothetical binary trait
hypoDatGeno | Simulated data for a hypothetical genetic SNPs
logLik.hapassoc | Return log-likelihood
pre.hapassoc | Pre-process the data before fitting it with hapassoc
summary.hapassoc | Summarize results of the hapassoc function