R: Analysing and Plotting Genotype-Phenotype Maps

# Analysing and Plotting Genotype-Phenotype Maps

## Documentation for package ‘gpmap’ version 0.1.3

- DESCRIPTION file

## Help Pages

gpmap-package | Tools for analysing and plotting genotype-phenotype maps
A | Dataset containing example GP maps
AA | Dataset containing example GP maps
AD | Dataset containing example GP maps
D | Dataset containing example GP maps
DA | Dataset containing example GP maps
DD | Dataset containing example GP maps
decompose_monotone | Decompose genotype-phenotype map(s) using monotone regression
decompose_monotone_single | Decompose genotype-phenotype map(s) using monotone regression
degree_of_monotonicity | Degree of monotonicity of GP map
degree_of_monotonicity_single | Degree of monotonicity of GP map
enumerate_genotypes | Function for enumerating genotypes for N biallelic loci
generate_gpmap | Function for creating genotype-phenotype (GP) maps
gpmap | Function for creating genotype-phenotype (GP) maps
monotone_regression | Perform monotone regression on a genotype-phenotype (GP) map
mouseweight | Dataset containing example GP maps
partial_genotype_order | Generate partial ordering of genotype space based from allele content of genotypes
plot.gpmap | Functions for creating lineplots of genotype-phenotype (GP) maps
plot.gpmap.decomp.mono | Functions for creating lineplots of genotype-phenotype (GP) maps
print.gpmap | Print function for 'gpmap' objects