R: Circular Genomic Permutation using Genome Wide Association p-Values

# Circular Genomic Permutation using Genome Wide Association p-Values

## Documentation for package ‘genomicper’ version 1.8

- DESCRIPTION file

## Help Pages

genomicper-package | Circular Genomic Permutations
demo | GWAS p_values demo data
genes_permutation | Gene-level Permutations
genome_order | Genome Order
genomicper | Circular Genomic Permutations
get_results | Circular Permutation Results
hyprbg | Hypergeometric Test (phyper)
plot_results | Plot Results Circular Permutation
read2_paths | Read to SNPs to sets; Map SNPs to gene-sets/pathways
read_pvals | Read GWAS p-values of association and Merge with SNP annotations
RHSA109582 | Reactome Pathway examples
RHSA1474244 | Reactome Pathway examples
RHSA164843 | Reactome Pathway examples
RHSA446343 | Reactome Pathway examples
RHSA8876384 | Reactome Pathway examples
RHSA8964572 | Reactome Pathway examples
RHSAXXXXX | Reactome Pathway examples
SNPsAnnotation | SNPs-Genes annotation to Distance 0 (SNPs within a gene)
snps_permutation | SNP-level permutations