bdiagNA                 Create a Block Diagonal Matrix with NA outside
                        the diagonal
bonferroni.test         Weighted Bonferroni-test
bonferroni.trimmed.simes.test
                        Trimmed Simes test for intersections of two
                        hypotheses and otherwise weighted
                        Bonferroni-test
checkCorrelation        Check correlation matrix
entangledMCP-class      Class entangledMCP
exampleGraphs           Functions that create different example graphs
gMCP                    Graph based Multiple Comparison Procedures
gMCP.extended           Graph based Multiple Comparison Procedures
gMCPResult-class        Class gMCPResult
gPADInterim-class       Class gPADInterim
generatePvals           generatePvals
generateWeights         generateWeights
graphMCP-class          Class graphMCP
graphTest               Multiple testing using graphs
hGraph                  Create multiplicity graphs using ggplot2
joinGraphs              Joins two graphMCP objects
matrix2graph            Matrix2Graph and Graph2Matrix
parametric.test         Weighted parametric test
permutations            Permutation for a design matrix
placeNodes              Placement of graph nodes
rejectNode              Rejects a node/hypothesis and updates the graph
                        accordingly.
replaceVariables        Replaces variables in a general graph with
                        specified numeric values
simConfint              Simultaneous confidence intervals for
                        sequentially rejective multiple test procedures
simes.on.subsets.test   Simes on subsets, otherwise Bonferroni
simes.test              Weighted Simes test
subgraph                Get a subgraph
substituteEps           Substitute Epsilon
weighted.test.functions
                        Weighted Test Functions for use with gMCP
