R: Estimates Allele Frequency on qPCR DeltaDeltaCq from Bulk Samples

# Estimates Allele Frequency on qPCR DeltaDeltaCq from Bulk Samples

## Documentation for package ‘freqpcr’ version 0.4.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

.freqpcr_loglike | Log-likelihood of obtaining Cq values under given parameter set.
.freqpcr_loglike_cont | Log-likelihood when sample allele ratio is continuous.
CqFreq | Output object of 'freqpcr()'.
CqFreq-class | Output object of 'freqpcr()'.
CqList | S4 class storing the dummy Cq data for performance test.
CqList-class | S4 class storing the dummy Cq data for performance test.
freqpcr | Estimate population allele frequency from the set of Cq measurements.
knownqpcr | Estimate auxiliary parameters using samples with known allele ratios.
knownqpcr_unpaired | Estimate auxiliary parameters when the sample pairs are incomplete.
make_dummy | Generate dummy DNA dataset ready for allele-frequency estimation.
sim_dummy | Simulate freqpcr estimation based on user-generated dummy data.