R: Analysis of fMRI Experiments

# Analysis of fMRI Experiments

## Documentation for package ‘fmri’ version 1.9.12.1

- DESCRIPTION file
- Code demos. Use demo() to run them.
- Package README

## Help Pages

condensefMRI | Extract data or residuals from a fmridata object
cutroi | I/O function
expandfMRI | Extract data or residuals from a fmridata object
extractData | Extract data or residuals from a fmridata object
fmri.cluster | Cluster thresholding.
fmri.design | Linear Model for FMRI Data
fmri.designG | Design matrix for fMRI group analysis
fmri.detrend | Detrend fMRI time series
fmri.lm | Linear Model for fMRI data
fmri.lmePar | Linear Mixed-effects Model for fMRI data
fmri.metaPar | Linear Mixed-effects Meta-Analysis model for fMRI data
fmri.pvalue | P-values
fmri.searchlight | Searchlight signal detection
fmri.sgroupICA | Spatial group ICA for fmri
fmri.sICA | Spacial ICA for fmri data
fmri.smooth | Smoothing Statistical Parametric Maps
fmri.stimulus | Linear Model for FMRI Data
fmri2oro | Convert Between fmridata and oro.nifti Objects
gen_fmridata | Generate fmridata example
getSearchlightPattern | Extract searchlight pattern from a SPM
hvred | Translation between smoothness and bandwidth for Gaussian kernel
ICAfingerprint | IC fingerprinting
niftiImage2fmri | Create fmridata object from niftiImage
oro2fmri | Convert Between fmridata and oro.nifti Objects
plot.fmridata | I/O functions
plot.fmrigroupICA | Diagnostics plots for objects of class "'fmriICA"'
plot.fmriICA | Diagnostics plots for objects of class "'fmriICA"'
plot.fmripvalue | Visualize fMRI p-value maps
plot.fmrisegment | I/O functions
print.fmridata | I/O functions
read.AFNI | I/O function
read.ANALYZE | I/O Functions
read.DICOM | I/O function
read.NIFTI | I/O Functions
setmask | Add or replace mask in an fmridata object
sincfilter | A function for sinc-interpolation
slicetiming | slicetiming for fmridata-objects
summary.fmridata | I/O functions
write.AFNI | I/O functions
write.ANALYZE | I/O Functions
write.NIFTI | I/O Functions