R: Extended Batch Marking Models

# Extended Batch Marking Models

## Documentation for package ‘extBatchMarking’ version 1.1.0

- DESCRIPTION file
- Package README

## Help Pages

batchLL | batchLL function provides the batch marking log-likelihood
batchLogit | batchLogit function
batchMarkHmmLL | Log-likelihood function for marked model.
batchMarkOptim | Marked model only.
batchMarkUnmarkHmmLL | Log-likelihood function for combined model.
batchMarkUnmarkOptim | Combined Marked and Unmarked models.
batchUnmark2Viterbi | batchUnmark2Viterbi function provides a wrapper for the batchUnmarkViterbi to compute the popuation abundance
batchUnmarkHmmLL | batchUnmarkHmmLL function provides the unmarked function to be optimized
batchUnmarkViterbi | batchUnmarkViterbi function provides the implementation of the Viterbi alogrithm for the unmarked model
dbinpois | Convolution of Poisson and Binomial for Batch
delta_g | initial probability function
gamma_gt | Transition State Probability 'gamma_gt' computes the transition probability matrix
plot.batchMarkOptim | Plot Method for batchMarkUnmarkOptim Objects
plot.batchMarkUnmarkOptim | Plot Method for batchMarkUnmarkOptim Objects
print.batchMarkOptim | Print Method for batchMarkOptim Objects
print.batchMarkUnmarkOptim | Print Method for batchMarkUnmarkOptim Objects
probs | State-dependent probability function
WeatherLoach | Weather Loach data