R: Interface Package for the 'EpiGraphDB' Platform

# Interface Package for the 'EpiGraphDB' Platform

## Documentation for package ‘epigraphdb’ version 0.2.3

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

confounder | MR evidence on confounding traits between exposure and outcome
cypher | Send a query in Cypher to EpiGraphDB
drugs_risk_factors | Drugs for risk factors
genetic_cor | Genetic correlations between traits
literature_gwas | Literature evidence regarding a GWAS trait
mappings_gene_to_protein | Return protein uniprot_id from associated genes
meta_nodes_list | List meta nodes (e.g. Gwas, Gene, etc.)
meta_nodes_list_node | List nodes under a meta node
meta_nodes_search_node | Search a node by its id field, or its name field
meta_rels_list | List meta rels (e.g. MR, etc.)
meta_rels_list_rel | List relationships under a meta relationship
mr | Return information related to Mendelian Randomisation
obs_cor | Observational correlations between traits
ontology_gwas_efo | Ontology association between EFO term and Gwas
pathway | Pathway evidence
pqtl | Return information related to the pQTL analysis
pqtl_list | Return a list of all proteins/exposures or traits/outcomes available in the database
pqtl_pleio | Return information related to the pleiotropy of SNPs
protein_in_pathway | For the list of proteins, returns their associated pathway data
query_epigraphdb | Send data request to an EpiGraphDB API endpoint
xqtl_multi_snp_mr | Multi SNP QTL MR evidence
xqtl_single_snp_mr | Single SNP QTL MR evidence