AbdFreqCount            Abundance Frequency Count of a Community
AllenH                  Phylogenetic Entropy of a Community
AlphaDiversity          Reduced-bias alpha diversity of a metacommunity
AlphaEntropy            Reduced-bias alpha entropy of a metacommunity
BetaDiversity           Reduced-bias beta diversity of a metacommunity
BetaEntropy             Reduced-bias beta entropy of a metacommunity
ChaoPD                  Phylogenetic Diversity of a Community
CommunityProfile        Diversity or Entropy Profile of a community
Coverage                Sample coverage of a community
DivAC                   Diversity accumulation.
DivEst                  Diversity Estimation of a metacommunity
DivPart                 Diversity Partition of a metacommunity
DivProfile              Diversity Profile of a metacommunity
Diversity               Hill number of a community
Dqz                     Similarity-based diversity of a community
EightSpAbundance        Abundances of 8 species to run examples.
EightSpTree             Functional tree with 8 species.
Enq                     Grassberger's expectation of n^q
EntropyCI               Entropy of Monte-Carlo simulated communities
GammaDiversity          Reduced-bias gamma diversity of a metacommunity
GammaEntropy            Reduced-bias gamma entropy of a metacommunity
GenSimpson              Generalized Simpson's Entropy and Diversity
Hqz                     Similarity-based entropy of a community
HqzBeta                 Similarity-based beta entropy of a community
Hurlbert                Hurlbert's Index and Explicit Diversity
KLq                     Generalized Kullback-Leibler divergence
MCdiversity             Meta-Community diversity class.
MCentropy               Meta-Community entropy class.
MergeMC                 Manipulation of meta-communities
MetaCommunity           Metacommunity class
Optimal.Similarity      Optimal scale parameter to transform a distance
                        matrix into a similarity matrix
PDFD                    Phylogenetic Diversity / Functional Diversity
                        of a Community
PPtree                  Preprocessed Trees.
Paracou618.Functional   Functional tree of species of Paracou field
                        station plots 6 and 18, two 1-ha plots
                        inventoried by the Bridge project.
Paracou618.MC           Paracou field station plots 6 and 18, two 1-ha
                        plots inventoried by the Bridge project.
Paracou618.Taxonomy     Taxonomy (Family - Genus - Species) of Paracou
                        field station plots 6 and 18, two 1-ha plots
                        inventoried by the Bridge project.
Paracou618.dist         Functional distances between pairs of species
                        of Paracou field station plots 6 and 18, two
                        1-ha plots inventoried by the Bridge project.
PhyloApply              Apply a Function over a Phylogenetic Tree
PhyloBetaEntropy        Phylogenetic Beta Entropy of a community
PhyloDiversity          Phylogenetic Diversity of a Community
PhyloEntropy            Phylogenetic Entropy of a community
PhyloValue              Phylogenetic entropy or diversity.
RAClnorm                Fit Distributions to Well-Known Rank Abundance
                        Curves.
Rao                     Rao Quadratic Entropy of a Community
Richness                Number of species of a community
Shannon                 Shannon entropy of a community
ShannonBeta             Shannon beta entropy of a community
SimTest                 SimTest class
Simpson                 Simpson entropy of a community
SimpsonBeta             Simpson beta entropy of a community
SpeciesDistribution     Species Distributions
Tsallis                 Tsallis (HCDT) Entropy of a community
TsallisBeta             Tsallis beta entropy of a community
entropart-package       Entropy Partitioning to Measure Diversity
expq                    Exponential of order q
lnq                     Logarithm of order q
rCommunity              Random Communities
