R: State-Space Mass-Balance Model for Marine Ecosystems

# State-Space Mass-Balance Model for Marine Ecosystems

## Documentation for package ‘ecostate’ version 0.3.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

abm3pc_sys | Adams-Bashford-Moulton for system of equations
add_equilibrium | Compute equilibrium values
compute_nll | Compute negative log-likelihood for EcoState model
compute_tracer | Calculate tracers, e.g., trophic level
dBdt | Dynamics from EcoSim
ddirmult | Dirichlet-multinomial
eastern_bering_sea | eastern Bering Sea ecosystem data
ecostate | fit EcoState model
ecostate_control | Detailed control for ecostate structure
ginv | Penrose-Moore pseudoinverse
gulf_of_alaska | eastern Gulf of Alaska data
logLik.ecostate | Marginal log-likelihood
ode23 | Non-stiff (and stiff) ODE solvers
plot_foodweb | Plot foodweb
print.ecostate | Print fitted ecostate object
print_ecopars | Print EcoSim parameters
rk4sys | Classical Runge-Kutta for system of equations
stanza_settings | Detailed control for stanza structure
whitehouse_2021 | Full rpath inputs for eastern Bering Sea