R: Graphical Modelling and Ordination using Copulas

# Graphical Modelling and Ordination using Copulas

## Documentation for package ‘ecoCopula’ version 1.0.6

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

cgr | Fitting Gaussian copula graphical lasso to co-occurrence data
cord | Model based ordination with Gaussian copulas
fitted.stackedsdm | Fitted values from a stackedsdm object
plot.cgr | Plot graph of direct species associations.
plot.cord | Plots an ordination of latent variables and their corresponding coefficients (biplot).
plot.stackedsdm | Plot residuals of stackedsdm.
predict.stackedsdm | Predictions from a stackedsdm object
print.cgr | Print function for cgr object
print.cord | Print function for cord object
residuals.stackedsdm | Calculate residuals from a stackedsdm object
simulate.cord | Simulates new data from a given cord object
spider | Spider data
stackedsdm | Stacked species regression models, possibly fitted in parallel
summary.cgr | Summary function for cgr object
summary.cord | Summary function for cgr object