R: Utilities for Data Analyses in Seed Germination/Emergence Assays

# Utilities for Data Analyses in Seed Germination/Emergence Assays

## Documentation for package ‘drcSeedGerm’ version 1.0.1

- DESCRIPTION file
- Package README

## Help Pages

alfalfaSG | Field-book for a germination assay with alfalfa
barley | A series of germination assays with barley
excalibur | Relationship between germination rate and water potential in oilseed rape (var. Excalibur)
festuca | Relationship between germination rate and water potential in Festuca arundinacea L.
GRPsi.Lin | Hydro-time models based on the germination rate
GRPsi.Pol | Hydro-time models based on the germination rate
GRPsi.Pol2 | Hydro-time models based on the germination rate
GRPsiLin | Hydro-time models based on the germination rate
GRPsiLin.fun | Hydro-time models based on the germination rate
GRPsiPol | Hydro-time models based on the germination rate
GRPsiPol.fun | Hydro-time models based on the germination rate
GRPsiPol2 | Hydro-time models based on the germination rate
GRPsiPol2.fun | Hydro-time models based on the germination rate
GRT.BS | Thermal-time models based on the germination rate
GRT.BS.fun | Thermal-time models based on the germination rate
GRT.BSb | Thermal-time models based on the germination rate
GRT.BSb.fun | Thermal-time models based on the germination rate
GRT.Ex | Thermal-time models based on the germination rate
GRT.Ex.fun | Thermal-time models based on the germination rate
GRT.Exb | Thermal-time models based on the germination rate
GRT.Exb.fun | Thermal-time models based on the germination rate
GRT.GH | Thermal-time models based on the germination rate
GRT.GH.fun | Thermal-time models based on the germination rate
GRT.GH2 | Thermal-time models based on the germination rate
GRT.GH2.fun | Thermal-time models based on the germination rate
GRT.M | Thermal-time models based on the germination rate
GRT.M.fun | Thermal-time models based on the germination rate
GRT.Mb | Thermal-time models based on the germination rate
GRT.Mb.fun | Thermal-time models based on the germination rate
GRT.RF | Thermal-time models based on the germination rate
GRT.RF.fun | Thermal-time models based on the germination rate
GRT.RFb | Thermal-time models based on the germination rate
GRT.RFb.fun | Thermal-time models based on the germination rate
GRT.YL | Thermal-time models based on the germination rate
GRT.YL.fun | Thermal-time models based on the germination rate
GRTPsi.BS | Hydro-Thermal-time models based on the germination rate
GRTPsi.BS.fun | Hydro-Thermal-time models based on the germination rate
GRTPsi.M | Hydro-Thermal-time models based on the germination rate
GRTPsi.M.fun | Hydro-Thermal-time models based on the germination rate
hordeum | Germination of Hordeum spontaneum at different temperatures and water potentials
HTE1 | Hydrotime model with log-logistic distribution of germination time (Onofri et al., 2018)
HTE1.fun | Hydrotime model with log-logistic distribution of germination time (Onofri et al., 2018)
HTE2 | Hydrotime model with log-logistic distribution of germination time (Onofri et al., 2018)
HTE2.fun | Hydrotime model with log-logistic distribution of germination time (Onofri et al., 2018)
HTE3 | Hydrotime model with log-logistic distribution of germination time (Onofri et al., 2018)
HTE3.fun | Hydrotime model with log-logistic distribution of germination time (Onofri et al., 2018)
HTex | Hydrotime model with Type II Extreme Value distribution of base water potential (Mesgaran et al., 2013)
HTex.fun | Hydrotime model with Type II Extreme Value distribution of base water potential (Mesgaran et al., 2013)
HTG | Hydrotime model with Gumbel distribution of base water potential (Mesgaran et al., 2013)
HTG.fun | Hydrotime model with Gumbel distribution of base water potential (Mesgaran et al., 2013)
HTL | Hydrotime model with logistic distribution of base water potential (Mesgaran et al., 2013)
HTL.fun | Hydrotime model with logistic distribution of base water potential (Mesgaran et al., 2013)
HTLL | Hydrotime model with log-logistic distribution of base water potential (Mesgaran et al., 2013)
HTLL.fun | Hydrotime model with log-logistic distribution of base water potential (Mesgaran et al., 2013)
HTnorm | Hydrotime model with normal distribution of base water potential (Bradford, 2002)
HTnorm.fun | Hydrotime model with normal distribution of base water potential (Bradford, 2002)
HTTEM | Hydro-thermal-time model with log-logistic distribution of germination time (Onofri et al., 2018)
HTTEM.fun | Hydro-thermal-time model with log-logistic distribution of germination time (Onofri et al., 2018)
HTTLL.BS | Hydro-thermal-time model with log-logistic distribution of base water potential (Mesgaran et al., 2017)
HTTLL.BS.fun | Hydro-thermal-time model with log-logistic distribution of base water potential (Mesgaran et al., 2017)
HTTLL.M | Hydro-thermal-time model with log-logistic distribution of base water potential (Mesgaran et al., 2017)
HTTLL.M.fun | Hydro-thermal-time model with log-logistic distribution of base water potential (Mesgaran et al., 2017)
HTTnorm.BS | Hydro-thermal-time model with normal distribution of base water potential (Bradford, 2002)
HTTnorm.BS.fun | Hydro-thermal-time model with normal distribution of base water potential (Bradford, 2002)
HTTnorm.M | Hydro-thermal-time model with normal distribution of base water potential (Bradford, 2002)
HTTnorm.M.fun | Hydro-thermal-time model with normal distribution of base water potential (Bradford, 2002)
HTW1 | Hydrotime model with Weibull Type I distribution of base water potential (Mesgaran et al., 2013)
HTW1.fun | Hydrotime model with Weibull Type I distribution of base water potential (Mesgaran et al., 2013)
HTW2 | Hydrotime model with Weibull Type II distribution of base water potential (Mesgaran et al., 2013)
HTW2.fun | Hydrotime model with Weibull Type II distribution of base water potential (Mesgaran et al., 2013)
jackGroupSE | Delete-a-Petri-dish jackknife
makeDrm | Reshape a seed germination datasets for time-to-event analyses (deprecated)
makeDrm2 | Reshape a seed germination datasets for time-to-event model fitting.
phalaris | A series of germination assays with Phalaris minor
PmaxPsi1 | Effect of environmental water potential or temperature on the germination capability of a seed lot
PmaxPsi1.fun | Effect of environmental water potential or temperature on the germination capability of a seed lot
PmaxT1 | Effect of environmental water potential or temperature on the germination capability of a seed lot
PmaxT1.fun | Effect of environmental water potential or temperature on the germination capability of a seed lot
rape | Germination data from an assay of rapeseed at decreasing water potential levels
rape2G | Germination data from an assay of rapeseed at decreasing water potential levels
TTEM | Thermal-time models with log-logistic distribution of germination time (Onofri et al., 2018)
TTEM.fun | Thermal-time models with log-logistic distribution of germination time (Onofri et al., 2018)
TTERF | Thermal-time models with log-logistic distribution of germination time (Onofri et al., 2018)
TTERF.fun | Thermal-time models with log-logistic distribution of germination time (Onofri et al., 2018)
TTERFc | Thermal-time models with log-logistic distribution of germination time (Onofri et al., 2018)
TTERFc.fun | Thermal-time models with log-logistic distribution of germination time (Onofri et al., 2018)