R: Fast Fitting of Stable Isotope Mixing Models with Covariates

# Fast Fitting of Stable Isotope Mixing Models with Covariates

## Documentation for package ‘cosimmr’ version 1.0.12

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

cosimmr-package | cosimmr: An R package for Stable Isotope Mixing Models
alligator_data | Alligator Data
cladocera_data | Cladocera data from Galloway et al 2015.
cosimmr | cosimmr: An R package for Stable Isotope Mixing Models
cosimmr_ffvb | Run a 'cosimmr_input' object through the Fixed Form Variational Bayes(FFVB) function
cosimmr_load | Function to load in cosimmr data and check for errors
geese_data | Geese stable isotope mixing data set
geese_data_day1 | A smaller version of the Geese stable isotope mixing data set
iso_data | Isopod Data
plot.cosimmr_input | Plot the 'cosimmr_input' data created from 'cosimmr_load'
plot.cosimmr_output | Plot different features of an object created from 'cosimmr_ffvb'.
plot.cosimmr_pred_out | Plot different features of an object created from 'cosimmr_ffvb'.
posterior_predictive | Plot the posterior predictive distribution for a cosimmr run
predict.cosimmr_output | Predicts proportion of each source in a mixture, based on values provided for covariates
print.cosimmr_input | Print simmr input object
print.cosimmr_output | Print a simmr output object
prior_viz | Plot the prior distribution for a cosimmr run
simmr_data_1 | A simple fake stable isotope mixing data set
simmr_data_2 | A 3-isotope fake stable isotope mixing data set
square_data | An artificial data set used to indicate effect of priors
summary.cosimmr_output | Summarises the output created with 'cosimmr_ffvb'
summary.cosimmr_pred_out | Summarises the output created with 'cosimmr_ffvb'