R: Analysis of Concept Maps and Concept Landscapes

# Analysis of Concept Maps and Concept Landscapes

## Documentation for package ‘comato’ version 1.1

- DESCRIPTION file

## Help Pages

analyze.graph.measures | Analyze graph measures of a concept map
analyze.graph.measures.conceptmap | Analyzing graph measures of a concept map
analyze.graph.measures.igraph | Analyzing graph measures of an igraph object
analyze.similarity | Analyzing graph similarity.
analyze.subgraphs | Analyzing small subgraph patterns.
as.matrix.conceptmap | Convert a conceptmap object to a matrix
as.matrix.conceptmaps | Convert a conceptmaps object to a matrix
clustering | Clustering maps of a conceptmaps object
concept.vector | Forming the concept vector of a conceptmap object
conceptmap | Constructing a conceptmap object
conceptmap.default | Basic creation of a conceptmap object
conceptmap.igraph | Creation of a conceptmap object from an existing graph
conceptmap.matrix | Creation of a conceptmap object from matrix data
conceptmaps | Constructing a conceptmaps object
conceptmaps.default | Basic creation of a conceptmaps object
conceptmaps.list | Creation of a conceptmaps object from a list
conceptmaps.matrix | Creation of a conceptmaps object from a matrix
edge.vector | Forming the edge vector of a conceptmap object
get.unified.concepts | Finding all concepts used.
Hopkins.index | Non-randomness of data
landscape | Aggregating the maps of a conceptmaps object into a concept landscape
MBM.cluster | MBMM clustering
merge.conceptmaps | Unify sets of conceptmaps
modify.concepts | Modify the concepts of concept maps
modify.concepts.conceptmap | Adapt list of concepts of a conceptmap object
modify.concepts.conceptmaps | Modifying the concepts of all maps of a conceptmaps object.
PAM.cluster | Similarity based clustering
pathfinder | Construct a Pathfinder network from a conceptmap or a concept landscape
pathfinder.conceptmaps | Creating a Pathfinder network from a conceptmaps object
pathfinder.igraph | Creating a Pathfinder network from an igraph object
pathfinder.matrix | Creating a Pathfinder network from a matrix
plot.conceptmap | Plotting a conceptmap
plot.conceptmaps | Plotting a series of concept maps
print.conceptmap | Display basic information of a conceptmap object
print.conceptmaps | Display basic information of a conceptmaps object
read.folder.tgf | Importing a set of concept maps from TGF files.
read.folder.yEd | Importing a set of concept maps from GraphML files.
read.tgf | Importing a concept map from a TGF file.
read.yEd | Importing a concept map from a GraphML file.
splice | Select a subset of a set of conceptmaps
summary.conceptmap | Return basic information of a conceptmap object
summary.conceptmaps | Return basic information of a conceptmaps object
unify.concepts | Unifying the concepts of a conceptmap object.
write.tgf | Saving a concept map to a TGF file
write.tgf.folder | Saving a set of concept maps to TGF files