BridgeRCore             BridgeR basic function for calculating RNA
                        half-life from BRIC-seq data
BridgeRDataSetFromMatrix
                        Calculate relative RPKM expression from
                        data.table format.
BridgeRDataSetFromRaw   Calculate relative RPKM expression from raw
                        data.
BridgeRDatasetChecker   BRIC-seq Dataset checker
BridgeRGrubbsTest       RNA half-life Grubbs test.
BridgeRHalfLifeCalc3models
                        Calculate RNA half-life for each gene using
                        3model method.
BridgeRHalfLifeCalcR2Select
                        Calculate RNA half-life for each gene using R2
                        selection method.
BridgeRNormalization    Calculate the normalized RPKM for BRIC-seq
                        dataset.
BridgeRNormalizationFactors
                        Calculate normalization factors for BRIC-seq
                        datasets.
BridgeRNormalizationFactorsHK
                        Calculate normalization factors from
                        house-keeping genes.
BridgeRPvalueEvaluation
                        Calculate Fold-change of RNA half-life and
                        p-value.
BridgeRResultChecker    BRIC-seq result checker
BridgeReport            Shinyapp reporting for drawing RNA decay curve.
CalcHalflifeDeviation   Calculate RNA half-life SD.
RNA_halflife_comparison
                        test BRIC-seq dataset for RNA half-life
                        comparison
RNA_halflife_comparison_HK
                        test BRIC-seq dataset for RNA half-life
                        comparison using House-keeping genes.
RNA_halflife_grubbs_test
                        test BRIC-seq dataset for p-value estimation
                        using grubbs test
halflife_table          BRIC-seq result dataset for p-value estimation
                        using grubbs test
