admix_prop_1d_circular
                        Construct admixture proportion matrix for
                        circular 1D geography
admix_prop_1d_linear    Construct admixture proportion matrix for 1D
                        geography
admix_prop_indep_subpops
                        Construct admixture proportion matrix for
                        independent subpopulations
bnpsd                   A package for modeling and simulating an
                        admixed population
coanc_admix             Construct the coancestry matrix of an admixture
                        model
coanc_to_kinship        Transform coancestry matrix to kinship matrix
coanc_tree              Calculate coancestry matrix corresponding to a
                        tree
draw_all_admix          Simulate random allele frequencies and
                        genotypes from the BN-PSD admixture model
draw_genotypes_admix    Draw genotypes from the admixture model
draw_p_anc              Draw random Uniform or Beta ancestral allele
                        frequencies
draw_p_subpops          Draw allele frequencies for independent
                        subpopulations
draw_p_subpops_tree     Draw allele frequencies for subpopulations
                        related by a tree
fit_tree                Fit a tree structure to a coancestry matrix
fixed_loci              Identify fixed loci
fst_admix               Calculate FST for the admixed individuals
make_p_ind_admix        Construct individual-specific allele frequency
                        matrix under the PSD admixture model
scale_tree              Scale a coancestry tree
tree_additive           Calculate additive edges for a coancestry tree,
                        or viceversa
tree_reindex_tips       Reindex tree tips in order of appearance in
                        edges
tree_reorder            Reorder tree tips to best match a desired order
undiff_af               Undifferentiate an allele distribution
