R: Bayesian Estimation and Optimisation of Expected False Discovery Rate

# Bayesian Estimation and Optimisation of Expected False Discovery Rate

## Documentation for package ‘bayefdr’ version 0.2.1

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

bayefdr-package | The 'nibbles' package.
bayefdr | The 'nibbles' package.
cumplot | Plot the cumulative median, mean, and 95% high posterior density region.
efdr | EFDR and EFNR estimation
efdr_search | Bayesian EFDR optimisation.
efnr | EFDR and EFNR estimation
head.bayefdr | Print methods for bayefdr objects.
optimal | Retrieve the index of the optimal probability threshold.
plot.bayefdr | Plot the EFDR, EFNR grids of a bayefdr object.
print.bayefdr | Print methods for bayefdr objects.
traceplot | Trace, marginal density histogram, and autocorrelation plot of MCMC draws.