Package: VIProDesign
Type: Package
Title: A Comprehensive Tool for Protein Design
Version: 0.1.0
Authors@R: c(person("Tatsiana", "Bylund", email = "tatsiana.bylund@nih.gov", role = c("aut", "cre")))
Description: Provides tools for designing virus protein panels through sequence clustering and protein sequence analysis. The package includes functionality for filtering sequences, removing redundancy, identifying outliers, clustering sequences, and calculating entropy to evaluate clustering quality. A publication describing these methods is in preparation and will be added once available.
License: Apache License 2.0
Encoding: UTF-8
RoxygenNote: 7.3.2
Imports: Biostrings, DECIPHER, cluster, pathviewr, dbscan, ape
Suggests: optparse
NeedsCompilation: no
Packaged: 2025-04-29 16:39:41 UTC; kiryst
Author: Tatsiana Bylund [aut, cre]
Maintainer: Tatsiana Bylund <tatsiana.bylund@nih.gov>
Repository: CRAN
Date/Publication: 2025-05-02 09:30:09 UTC
Built: R 4.6.0; ; 2026-04-25 13:30:45 UTC; unix
